A selection of developed projects
OrbiTox (2025)
Visualization platform for NAMs and read-across exploration of multi-domain data.
BioBricks.ai (2025)
Versioned data registry for life sciences data assets. Developer and scientific advisor.
Integrated Chemical Environment (ICE)
Scientific lead while supporting NICEATM. Web resource for chemical data and in vitro / in silico tools.
https://ice.ntp.niehs.nih.gov/
DASS App (2024)
Computational application of internationally harmonized defined approaches to skin sensitization.
https://doi.org/10.1186/s12859-023-05617-1
ChemMaps v2 (2023)
Webserver to navigate and mine an extended environmental chemical universe.
https://apps.sciome.com/chemmaps/
PFAS-Exchange
Collaborated on enhancing the PFAS-Exchange platform (Ruby).
Tox21BodyMap (2020)
Webtool allowing a user to identify target organs in the human body where a substance is estimated to be more likely to produce effects.
https://apps.sciome.com/bodymap/
InterPred (2020)
Platform to predict interference chemicals based on large-scale chemical screening.
https://apps.sciome.com/interferences/
Key characteristics of carcinogens
Literature and assay mapping for the key characteristics of carcinogens.
https://keycharacteristics.org/ ยท SysRev project
RealityConvert (2017)
Software tool and associated website to convert molecular objects to high-quality 3D models directly compatible for AR and VR applications.
Neighborhood (2017)
Data-mining tools to analyze the neighborhood of selected ionizable groups.
https://github.com/ABorrel/ionic
LSRs (2016)
Method to extract local structural replacements from the Protein Data Bank, optimized for phosphate groups.
https://github.com/ABorrel/LSRs
PockDrug-Server (2015)
Druggability model to predict if a protein pocket can bind a drug-like molecule. The web server also includes tools for pocket analysis.
GOHTAM-server (2012โ2015)
Detection of horizontal transfers based on a combination of parametric methods. (no longer available)